I think the point is that if you run bioclite under R 2.8.0 it installs packages that then warn they were built under 2.8.1 -----Original Message----- From: bioconductor-bounces@stat.math.ethz.ch on behalf of Vincent Carey Sent: Sun 22/02/2009 10:28 AM To: Daren Tan Cc: bioconductor at stat.math.ethz.ch Subject: Re: [BioC] Keep getting warning messages of package 'XYZ' was builtunder R version 2.8.1 This is a warning. It is telling you that there is a mismatch between the version of R that you are running (2.8.0, which is not current) and 2.8.1 (the current version, that we use to build the packages). There is no indication that anything is "broken", but it is not really possible to give any assurances of the sort you seek. To get rid of the warning, which will only be observed at install time, you would need to upgrade R to 2.8.1. If you run the examples of the package, or build the vignette, and find that the computations you generate agree with those of the vignette, that would be some assurance that nothing is drastically wrong. On Sun, Feb 22, 2009 at 1:18 AM, Daren Tan <daren76 at="" hotmail.com=""> wrote: > > > I just installed another bioconductor package "seqinr". I only noticed the > warning message today, and fear that my R or bioconductor is broken. Please > give me some assurance it is working fine. I dread to reinstall R and > bioconductor again. > > > library("seqinr") > Warning message: > package 'seqinr' was built under R version 2.8.1 > > > sessionInfo() > R version 2.8.0 (2008-10-20) > i386-pc-mingw32 > locale: > LC_COLLATE=English_United States.1252;LC_CTYPE=English_United > States.1252;LC_MONETARY=English_United > States.1252;LC_NUMERIC=C;LC_TIME=English_United States.1252 > attached base packages: > [1] stats graphics grDevices utils datasets methods base > other attached packages: > [1] seqinr_2.0-2 > loaded via a namespace (and not attached): > [1] tools_2.8.0 > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: > http://news.gmane.org/gmane.science.biology.informatics.conductor > [[alternative HTML version deleted]] _______________________________________________ Bioconductor mailing list Bioconductor at stat.math.ethz.ch https://stat.ethz.ch/mailman/listinfo/bioconductor Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor