Question: Annotating Illumina Data from ArrayExpress
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gravatar for Md.Mamunur Rashid
9.4 years ago by
Md.Mamunur Rashid260 wrote:
Dear List, I have downloaded some illumina data from arrayexpress. ArrayExpress seems to add some more text in front of the Illumina probeID which does not allow IlluminaID2nuID(featureNames(eset)) method to convert to NuIds. Is there any way around to this problem. Any help is appreciated. Thanks in advance. regards, Md.Mamunur Rashid
convert arrayexpress • 412 views
ADD COMMENTlink modified 9.4 years ago by Marc Carlson7.2k • written 9.4 years ago by Md.Mamunur Rashid260
Answer: Annotating Illumina Data from ArrayExpress
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gravatar for Marc Carlson
9.4 years ago by
Marc Carlson7.2k
United States
Marc Carlson7.2k wrote:
Have you looked at: ?sub To see if you can just trim it off? Marc Md.Mamunur Rashid wrote: > Dear List, > I have downloaded some illumina data from arrayexpress. ArrayExpress > seems to add > > some more text in front of the Illumina probeID which does not allow > > IlluminaID2nuID(featureNames(eset)) method to convert to NuIds. Is > there any way > around to this problem. Any help is appreciated. > > Thanks in advance. > > regards, > Md.Mamunur Rashid > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: > http://news.gmane.org/gmane.science.biology.informatics.conductor >
ADD COMMENTlink written 9.4 years ago by Marc Carlson7.2k
Hi Marc, Thanks it works. Cheers. best regards, Mamun On 11/12/2009 09:24 PM, Marc Carlson wrote: > Have you looked at: > > ?sub > > To see if you can just trim it off? > > Marc > > > > Md.Mamunur Rashid wrote: > >> Dear List, >> I have downloaded some illumina data from arrayexpress. ArrayExpress >> seems to add >> >> some more text in front of the Illumina probeID which does not allow >> >> IlluminaID2nuID(featureNames(eset)) method to convert to NuIds. Is >> there any way >> around to this problem. Any help is appreciated. >> >> Thanks in advance. >> >> regards, >> Md.Mamunur Rashid >> >> _______________________________________________ >> Bioconductor mailing list >> Bioconductor@stat.math.ethz.ch >> https://stat.ethz.ch/mailman/listinfo/bioconductor >> Search the archives: >> http://news.gmane.org/gmane.science.biology.informatics.conductor >> >> > > [[alternative HTML version deleted]]
ADD REPLYlink written 9.4 years ago by Md.Mamunur Rashid260
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