Hi Sneha, sneha patil wrote: > hii, > Myself Sneha.... > *I am creating own chip CDF and probe package file with a window R > *2.0.1 >> * version. > *>* > *>* The make.cdf.package works fine, > *>* > *make.cdf.package("HuGene-1_0-st-v1.r3.cdf", species = "Homosapiens_sp") > Reading CDF file. > Creating CDF environment > Wait for about 323 > dots................................................................ ...................................................................... ...................................................................... ...................................................................... ............................................ > Creating package in C:/Users/neurooncolab new > pc/Documents/R/win-library/2.10/hugene10stv1.r3cdf > > README PLEASE: > A source package has now been produced in > C:/Users/neurooncolab new > pc/Documents/R/win-library/2.10/hugene10stv1.r3cdf. > Before using this package it must be installed via 'R CMD INSTALL' > at a terminal prompt (or DOS command shell). > If you are using Windows, you will need to get set up to install packages. > See the 'R Installation and Administration' manual, specifically > Section 6 'Add-on Packages' as well as 'Appendix E: The Windows Toolset' > for more information. > Alternatively, you could use make.cdf.env(), which will not require you to > install a package. > However, this environment will only persist for the current R session > unless you save() it. Did you read the above message? I tried to make it as explicit as possible, but perhaps there is something misleading. If you could tell me what exactly you don't understand then I will try to explain it further and maybe make changes. Best, Jim > >> Rcmd install hugene10stv1.r3cdf > Error: unexpected symbol in "Rcmd install" >> R CMD INSTALL hugene10stv1.r3cdf > Error: unexpected symbol in "R CMD" >> RCMD INSTALL hugene10stv1.r3cdf > Error: unexpected symbol in "RCMD INSTALL" >> hugene10stv1.r3 = make.cdf.env("HuGene-1_0-st-v1.r3.cdf") > Reading CDF file. > Creating CDF environment > Wait for about 323 dots..................>* * > > ** > *Okkk but now i am getting the following error * > ** >> library(hugene10stv1.r3cdf) > Error in library(hugene10stv1.r3cdf) : > 'hugene10stv1.r3cdf' is not a valid installed package > * > > *>* I have tried google, but can not get the right solution. Could any one > *>* help me to solve the trouble? > *>* Thanks a lot! > * > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor -- James W. MacDonald, M.S. Biostatistician Douglas Lab University of Michigan Department of Human Genetics 5912 Buhl 1241 E. Catherine St. Ann Arbor MI 48109-5618 734-615-7826 ********************************************************** Electronic Mail is not secure, may not be read every day, and should not be used for urgent or sensitive issues