pd.mapping250k.XXX & genome build GRCh37/hg19
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Geoff Jentry ▴ 50
@geoff-jentry-3956
Last seen 10.2 years ago
Hi ... It appears that the current version of the pd.mapping250k.(sty|nsp) packages are built using genome build 36 - are there plans to update these to GRCh37 and if so when will that happen? I could see it being done w/ the next annotation package refresh but wanted to be sure. Thanks -J
Annotation Annotation • 1.3k views
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@benilton-carvalho-1375
Last seen 4.7 years ago
Brazil/Campinas/UNICAMP
Hi Jeff, I'm hoping to be able to update the SNP annotations to the latest provided by Affymetrix for next release. b On Thu, Mar 11, 2010 at 7:46 PM, Geoff Jentry <geoffjentry at="" hexdump.org=""> wrote: > Hi ... > > It appears that the current version of the pd.mapping250k.(sty|nsp) packages > are built using genome build 36 - are there plans to update these to GRCh37 > and if so when will that happen? ?I could see it being done w/ the next > annotation package refresh but wanted to be sure. > > Thanks > -J > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: > http://news.gmane.org/gmane.science.biology.informatics.conductor >
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> I'm hoping to be able to update the SNP annotations to the latest > provided by Affymetrix for next release. Great, thanks Benilton.
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