Prashantha, Thank you very much, MeDIP protocol is used for our project! Regards Prashantha Hebbar a ?crit : > Hi Mohamed, > > Bioconductor packages are available but depends on the type of > experimental protocol followed. If you have followed DMH method, you > can use limma, If you have used MeDIP, you can use MEDME. > > There is another package for MeDIP but which do not come under R, that > is Batman. > > Regards, > Prashantha > > Prashantha Hebbar Kiradi, > Manipal University, > Manipal, India > > --- On *Tue, 4/6/10, Mohamed Lajnef /<mohamed.lajnef at="" inserm.fr="">/* wrote: > > > From: Mohamed Lajnef <mohamed.lajnef at="" inserm.fr=""> > Subject: [BioC] Methylation data > To: bioconductor at stat.math.ethz.ch > Date: Tuesday, April 6, 2010, 8:16 AM > > Dear All, > > I 'am looking for a package in R to analyse methylation databases > generated from Agilent CpG Islanfds. > Any help will be appreciated > Regards > Mohamed > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > </mc> > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: > http://news.gmane.org/gmane.science.biology.informatics.conductor > > -- Mohamed Lajnef,IE INSERM U955 eq 15 P?le de Psychiatrie H?pital CHENEVIER 40, rue Mesly 94010 CRETEIL Cedex FRANCE Mohamed.lajnef at inserm.fr tel : 01 49 81 31 31 (poste 18470) Sec : 01 49 81 32 90 fax : 01 49 81 30 99