Hi, Following is the error when i try to use the Bioconductor GEOquery Package, > gds3224=getGEO(filename="GDS3224.soft.gz") Error in read.table(con, sep = "\t", header = FALSE, nrows = nseries) : invalid 'nlines' argument Thank you very much.. -- Rahul Sharma, Junior Research Fellow, School of Environmental Sciences, Jawaharlal Nehru University New Delhi-110067, India [[alternative HTML version deleted]]

On Mon, May 3, 2010 at 10:28 AM, Rahul Sharma <rahularjun86 at="" gmail.com=""> wrote: > Hi, > ?Following is the error when i try to use the Bioconductor GEOquery > Package, > > >> gds3224=getGEO(filename="GDS3224.soft.gz") > Error in read.table(con, sep = "\t", header = FALSE, nrows = nseries) : > ?invalid 'nlines' argument Hi, Rahul. I am not able to reproduce this error with the current GEOquery package. If you are not using the newest version of R and Bioconductor, could you try upgrading? If you still have problems after doing so, let me know and be sure to include the output of sessionInfo(). Thanks, Sean