Troubles installing pcaMethods on R2.12.1
0
Entering edit mode
@alfons-gonzalez-4573
Last seen 6.5 years ago
Dear all, I'm having exactly the same problem trying to install pcaMethods on R 2.12.2, on a CentOS 5.4 x86_64: biocLite("pcaMethods") Using R version 2.12.2, biocinstall version 2.7.4. Installing Bioconductor version 2.7 packages: [1] "pcaMethods" Please wait... trying URL 'http://www.bioconductor.org/packages/2.7/bioc/src/contrib/pcaMethods_ 1.32.0.tar.gz' Content type 'application/x-gzip' length 467350 bytes (456 Kb) opened URL ================================================== downloaded 456 Kb * installing *source* package ?pcaMethods? ... ** libs g++ -I/usr/local/R-2.12.2/lib64/R/include -I/usr/local/R-2.12.2/lib64/R/library/Rcpp/include -I/usr/local/include -fpic -g -O2 -c nipals.cpp -o nipals.o nipals.cpp: In function ?SEXPREC* Nipals(SEXPREC*, SEXPREC*)?: nipals.cpp:37: error: ?RcppParams? was not declared in this scope nipals.cpp:37: error: expected `;' before ?rparams? nipals.cpp:38: error: ?rparams? was not declared in this scope nipals.cpp:42: error: ?RcppMatrix? was not declared in this scope nipals.cpp:42: error: expected primary-expression before ?double? nipals.cpp:42: error: expected `;' before ?double? nipals.cpp:43: error: expected primary-expression before ?double? nipals.cpp:43: error: expected `;' before ?double? nipals.cpp:44: error: ?mat? was not declared in this scope nipals.cpp:46: error: expected primary-expression before ?double? nipals.cpp:46: error: expected `;' before ?double? nipals.cpp:47: error: expected primary-expression before ?double? nipals.cpp:47: error: expected `;' before ?double? nipals.cpp:48: error: expected primary-expression before ?double? nipals.cpp:48: error: expected `;' before ?double? nipals.cpp:120: error: ?est_mat? was not declared in this scope nipals.cpp:121: error: ?omat? was not declared in this scope nipals.cpp:130: error: ?tt? was not declared in this scope nipals.cpp:133: error: ?pp? was not declared in this scope nipals.cpp:146: error: ?RcppResultSet? was not declared in this scope nipals.cpp:146: error: expected `;' before ?rs? nipals.cpp:148: error: expected primary-expression before ?double? nipals.cpp:148: error: expected `;' before ?double? nipals.cpp:149: error: expected primary-expression before ?double? nipals.cpp:149: error: expected `;' before ?double? nipals.cpp:152: error: ?ttt? was not declared in this scope nipals.cpp:152: error: ?tt? was not declared in this scope nipals.cpp:157: error: ?ppp? was not declared in this scope nipals.cpp:157: error: ?pp? was not declared in this scope nipals.cpp:160: error: ?rs? was not declared in this scope nipals.cpp:160: error: ?ttt? was not declared in this scope nipals.cpp:161: error: ?ppp? was not declared in this scope nipals.cpp:163: error: ?rs? was not declared in this scope nipals.cpp:163: error: ?tt? was not declared in this scope nipals.cpp:164: error: ?pp? was not declared in this scope nipals.cpp:166: error: ?rs? was not declared in this scope nipals.cpp:170: error: ?copyMessageToR? was not declared in this scope nipals.cpp:172: error: ?copyMessageToR? was not declared in this scope nipals.cpp:175: error: ?copyMessageToR? was not declared in this scope nipals.cpp:177: error: ?copyMessageToR? was not declared in this scope make: *** [nipals.o] Error 1 ERROR: compilation failed for package ?pcaMethods? * removing ?/usr/local/R-2.12.2/lib64/R/library/pcaMethods? Have you find any solution? thanks in advance, ALfons
pcaMethods pcaMethods • 572 views
ADD COMMENTlink

Login before adding your answer.

Similar Posts
Loading Similar Posts
Traffic: 183 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.4