Question: Error in` [. Data.frame `(obj, , columns [[a]]): undefined columns selected"
0
gravatar for Paz Tapia Ramirez
8.2 years ago by
Paz Tapia Ramirez150 wrote:
Hello, I've been working with the package of bioconductor Agi4x44PreProcess, but reads data error says "Error in` [. Data.frame `(obj,, columns [[a]]): undefined columns selected" My file is targets.txt: FileName Treatment GErep Subject Array 1.txt ISO 1 Subj 1 2.txt ISO 2 Subj 1 3.txt ISO 1 Subj 1 4.txt ISO 2 Subj 1 And un example of head of 1.txt file is FEATURES FeatureNum Row Col accessions chr_coord SubTypeMask SubTypeName ProbeUID ControlType ProbeName GeneName SystematicName Description PositionX PositionY gSurrogateUsed gIsFound gProcessedSignal gProcessedSigError gNumPixOLHi gNumPixOLLo gNumPix gMeanSignal gMedianSignal gPixSDev gPixNormIQR gBGNumPix gBGMeanSignal gBGMedianSignal gBGPixSDev gBGPixNormIQR gNumSatPix gIsSaturated gIsLowPMTScaledUp gIsBGNonUnifOL gIsFeatPopnOL gIsBGPopnOL IsManualFlag gBGSubSignal gBGSubSigError gIsPosAndSignif gPValFeatEqBG gNumBGUsed gIsWellAboveBG gBGUsed gBGSDUsed ErrorModel gSpatialDetrendIsInFilteredSet gSpatialDetrendSurfaceValue SpotExtentX SpotExtentY gNetSignal gMultDetrendSignal gProcessedBackground gProcessedBkngError IsUsedBGAdjust gInterpolatedNegCtrlSub gIsInNegCtrlRange gIsUsedInMD Tab-separated [[alternative HTML version deleted]]
agi4x44preprocess • 1.4k views
ADD COMMENTlink modified 8.2 years ago by Paz Tapia Ramirez40 • written 8.2 years ago by Paz Tapia Ramirez150
Answer: Error in` [. Data.frame `(obj, , columns [[a]]): undefined columns selected"
0
gravatar for Paz Tapia Ramirez
8.2 years ago by
Paz Tapia Ramirez40 wrote:
Hello, I've been working with the package of bioconductor Agi4x44PreProcess, but reads data error says "Error in` [. Data.frame `(obj,, columns [[a]]): undefined columns selected" My file is targets.txt: FileName Treatment GErep Subject Array 1.txt ISO 1 Subj 1 2.txt ISO 2 Subj 1 3.txt ISO 1 Subj 1 4.txt ISO 2 Subj 1 And un example of head of 1.txt file is FEATURES FeatureNum Row Col accessions chr_coord SubTypeMask SubTypeName ProbeUID ControlType ProbeName GeneName SystematicName Description PositionX PositionY gSurrogateUsed gIsFound gProcessedSignal gProcessedSigError gNumPixOLHi gNumPixOLLo gNumPix gMeanSignal gMedianSignal gPixSDev gPixNormIQR gBGNumPix gBGMeanSignal gBGMedianSignal gBGPixSDev gBGPixNormIQR gNumSatPix gIsSaturated gIsLowPMTScaledUp gIsBGNonUnifOL gIsFeatPopnOL gIsBGPopnOL IsManualFlag gBGSubSignal gBGSubSigError gIsPosAndSignif gPValFeatEqBG gNumBGUsed gIsWellAboveBG gBGUsed gBGSDUsed ErrorModel gSpatialDetrendIsInFilteredSet gSpatialDetrendSurfaceValue SpotExtentX SpotExtentY gNetSignal gMultDetrendSignal gProcessedBackground gProcessedBkngError IsUsedBGAdjust gInterpolatedNegCtrlSub gIsInNegCtrlRange gIsUsedInMD Tab-separated [[alternative HTML version deleted]]
ADD COMMENTlink written 8.2 years ago by Paz Tapia Ramirez40
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 335 users visited in the last hour