Question: baySeq issues
gravatar for Iain Gallagher
6.3 years ago by
United Kingdom
Iain Gallagher910 wrote:
Hello list I'm having some problems with the baySeq package for RNA-Seq analysis. Basically if I filter my data (non-normalised counts at the gene level) to get rid of genes with low expression (<1 count / million as per edgeR manual - this is just a filter choice) I cannot get the plotMA.CD command in baySeq to work. It fails with: Error in plot.window(...) : need finite 'ylim' values In addition: Warning message: In max(abs((log2(Adata) - log2(Bdata))[-union(Azeros, Bzeros)])) : no non-missing arguments to max; returning -Inf
ADD COMMENTlink written 6.3 years ago by Iain Gallagher910
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