Hi Bioconductor community: I am learning the book title:Bioconductor Case Studies". On page 26, >library("CLL") >data("CLLbatch") >CLLbatch??? My computer says"In data("CLLbatch") : zipped data found for package ???CLL???.That is defunct, so please re-install the package." I reinstall the "CLL" package, the same problem occurs. Can any one tell me how to solve this problem? Thanks, William -- output of sessionInfo(): R version 2.13.1 (2011-07-08) Platform: i386-pc-mingw32/i386 (32-bit) locale: [1] LC_COLLATE=English_United States.1252 [2] LC_CTYPE=English_United States.1252 [3] LC_MONETARY=English_United States.1252 [4] LC_NUMERIC=C [5] LC_TIME=English_United States.1252 attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] CLL_1.2.8 affy_1.30.0 Biobase_2.12.2 loaded via a namespace (and not attached): [1] affyio_1.20.0 preprocessCore_1.14.0 tools_2.13.1 -- Sent via the guest posting facility at bioconductor.org.

Hi William -- On 10/22/2011 11:20 AM, william [guest] wrote: > > > Hi Bioconductor community: > > I am learning the book title:Bioconductor Case Studies". On page 26, >> library("CLL") >> data("CLLbatch") >> CLLbatch??? > My computer says"In data("CLLbatch") : zipped data found for package ???CLL???.That is defunct, so please re-install the package." I reinstall the "CLL" package, the same problem occurs. > > Can any one tell me how to solve this problem? I think this is a problem on our end; try source("http://bioconductor.org/biocLite.R") biocLite("CLL", type="source") library(CLL) data(CLLbatch) > > Thanks, > > William > > > -- output of sessionInfo(): > > R version 2.13.1 (2011-07-08) > Platform: i386-pc-mingw32/i386 (32-bit) > > locale: > [1] LC_COLLATE=English_United States.1252 > [2] LC_CTYPE=English_United States.1252 > [3] LC_MONETARY=English_United States.1252 > [4] LC_NUMERIC=C > [5] LC_TIME=English_United States.1252 > > attached base packages: > [1] stats graphics grDevices utils datasets methods base > > other attached packages: > [1] CLL_1.2.8 affy_1.30.0 Biobase_2.12.2 > > loaded via a namespace (and not attached): > [1] affyio_1.20.0 preprocessCore_1.14.0 tools_2.13.1 > > -- > Sent via the guest posting facility at bioconductor.org. > > _______________________________________________ > Bioconductor mailing list > Bioconductor at r-project.org > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor -- Computational Biology Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N. PO Box 19024 Seattle, WA 98109 Location: M1-B861 Telephone: 206 667-2793