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Last seen 9.6 years ago
I got a new PC running on ubuntu and tried to install the Rsamtools
package.
got the following error:
> source("http://www.bioconductor.org/biocLite.R")
> biocLite("Rsamtools")
Warning message:
In getDependencies(pkgs, dependencies, available, lib) :
package ??Rsamtools?? is not available
does that mean that this package is not available for my linux
distribution??
thank you
conny
-- output of sessionInfo():
R version 2.10.1 (2009-12-14)
x86_64-pc-linux-gnu
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=C LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
-- output of sessionInfo():
> source("http://www.bioconductor.org/biocLite.R")
> biocLite("Rsamtools")
Warning message:
In getDependencies(pkgs, dependencies, available, lib) :
package ??Rsamtools?? is not available
-- output of sessionInfo():
R version 2.10.1 (2009-12-14)
x86_64-pc-linux-gnu
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=C LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
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