Dear useRs, I am trying to use the MEDIPS package in Bioconductor. The tutorial says that one of the supplied reference genomes must be used. Does anyone know how to produce a custom reference genome in case one's genome of interest is not one that is on this list? Thanks for any help, Kelly V. [[alternative HTML version deleted]]

Have a look at the 'How to forge a BSgenome data package' document, http://bioconductor.org/packages/2.10/bioc/html/BSgenome.html Let us know if you have questions. Valerie On 01/02/2012 10:25 AM, Vining, Kelly wrote: > Dear useRs, > I am trying to use the MEDIPS package in Bioconductor. The tutorial says that one of the supplied reference genomes must be used. Does anyone know how to produce a custom reference genome in case one's genome of interest is not one that is on this list? > > Thanks for any help, > > Kelly V. > > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at r-project.org > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor