Proxy setting for R/Bioconductor
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Karthik ▴ 10
@karthik-5091
Last seen 9.6 years ago
Hello, I am working behind an institutional proxy and can not get past it. How should I enable proxy in R. I tried: "path_to_R\bin\i386\Rgui.exe" http_proxy=http://gannet/ http_proxy_user=ask and gave user name and password, but when I tried to run: source("http://bioconductor.org/biocLite.R") it gave : Error in file(filename, "r", encoding = encoding) : cannot open the connection In addition: Warning message: In file(filename, "r", encoding = encoding) : cannot open: HTTP status was '404 Not Found' how to go about this issue?? Thanks a lot. Karthu
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@vincent-j-carey-jr-4
Last seen 6 weeks ago
United States
This is not a problem with Bioconductor. In R, see ?download.file and work with R-help mailing list if the available documentation is inadequate. On Sat, Feb 4, 2012 at 4:34 AM, Karthik <karthikkn@aims.amrita.edu> wrote: > Hello, > > I am working behind an institutional proxy and can not get past it. How > should I > enable proxy in R. I tried: > > "path_to_R\bin\i386\Rgui.exe" http_proxy=http://gannet/http_proxy_user=ask > > and gave user name and password, but when I tried to run: > > source("http://bioconductor.org/biocLite.R") > > it gave : > > Error in file(filename, "r", encoding = encoding) : > cannot open the connection > In addition: Warning message: > In file(filename, "r", encoding = encoding) : > cannot open: HTTP status was '404 Not Found' > > how to go about this issue?? > > Thanks a lot. > > Karthu > > _______________________________________________ > Bioconductor mailing list > Bioconductor@r-project.org > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: > http://news.gmane.org/gmane.science.biology.informatics.conductor > [[alternative HTML version deleted]]
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On Sat, Feb 4, 2012 at 7:09 AM, Vincent Carey <stvjc at="" channing.harvard.edu=""> wrote: > This is not a problem with Bioconductor. ?In R, see ?download.file and work > with R-help mailing list if the > available documentation is inadequate. > Also see ?internet2. Dan > On Sat, Feb 4, 2012 at 4:34 AM, Karthik <karthikkn at="" aims.amrita.edu=""> wrote: > >> Hello, >> >> I am working behind an institutional proxy and can not get past it. How >> should I >> enable proxy in R. I tried: >> >> ?"path_to_R\bin\i386\Rgui.exe" http_proxy=http://gannet/http_proxy_user=ask >> >> and gave user name and password, but when I tried to run: >> >> source("http://bioconductor.org/biocLite.R") >> >> it gave : >> >> Error in file(filename, "r", encoding = encoding) : >> ?cannot open the connection >> In addition: Warning message: >> In file(filename, "r", encoding = encoding) : >> ?cannot open: HTTP status was '404 Not Found' >> >> how to go about this issue?? >> >> Thanks a lot. >> >> Karthu >> >> _______________________________________________ >> Bioconductor mailing list >> Bioconductor at r-project.org >> https://stat.ethz.ch/mailman/listinfo/bioconductor >> Search the archives: >> http://news.gmane.org/gmane.science.biology.informatics.conductor >> > > ? ? ? ?[[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at r-project.org > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor
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