marrayInput and QuantArray
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Pawel Herzyk ▴ 30
@pawel-herzyk-97
Last seen 9.7 years ago
This is a multi-part message in MIME format. ------=_NextPart_000_00AB_01C27605.32E333E0 Content-Type: text/plain; charset="iso-8859-1" Content-Transfer-Encoding: quoted-printable Hi there, The tutorial shows that marrayInput can read GenePix and Spot files. Is = there any way to read QuantArray files?=20 QuantArray doesn't seem to use blocks but uses rows and columns in the = layout definition.=20 I could write a script to preprocess the QuantArray files but perhaps = there is an easier way? Pawel ------=_NextPart_000_00AB_01C27605.32E333E0 Content-Type: text/html; charset="iso-8859-1" Content-Transfer-Encoding: quoted-printable <html><head> <meta content="3D"text/html;" charset="3Diso-8859-1"" =="" http-equiv="3DContent-Type"> <meta content="3D"MSHTML" 5.00.3315.2870"="" name="3DGENERATOR"> <style></style> </head> <body bgcolor="3D#c8e0d8">
<font face="3DArial" size="3D2">Hi there,</font>
 
<font face="3DArial" size="3D2">The tutorial shows that marrayInput can = read=20 GenePix and Spot files. Is there any way to read QuantArray files? = </font>
<font face="3DArial" size="3D2">QuantArray doesn't seem to use blocks = but uses rows=20 and columns in the layout definition. </font>
<font face="3DArial" size="3D2">I could write a script to preprocess = the QuantArray=20 files but perhaps there is an easier way?</font>
 
<font face="3DArial" size="3D2">Pawel</font>
 
<font face="3DArial" size="3D2"></font> 
</body></html> ------=_NextPart_000_00AB_01C27605.32E333E0--
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@harry-mangalam-99
Last seen 9.7 years ago
I'm also interested in supporting QuantArray files. Obviously some processing is going to be necessary; but better to do this internally if possible for better integration, I guess. Is there a definition of what minimum variables have to be supported in order to use the rest of the package? Harry Pawel Herzyk wrote: > Hi there, > > The tutorial shows that marrayInput can read GenePix and Spot files. Is > there any way to read QuantArray files? > QuantArray doesn't seem to use blocks but uses rows and columns in the > layout definition. > I could write a script to preprocess the QuantArray files but perhaps > there is an easier way? > > Pawel > > -- Cheers, Harry Harry J Mangalam - 949 856 2847 (v&f) - hjm@tacgi.com <<plain text="" preferred="">>
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