Hello Syed, Thanks for the suggestion. Regards, mlsc On Mon, Apr 2, 2012 at 3:54 PM, Syed Haider <syed.haider@oicr.on.ca> wrote: > Dear MLSC, > > From the path it looks you are trying to use biomaRt to communicate to > biomart v0.8 (release candidate 6). I believe biomaRt package does not > support the new webservice API of biomart v0.8. It should work if your > biomart installation was v0.7. > > Best, > Syed > > > > On 02/04/2012 13:30, MLSC wrote: > >> Hello friends, >> I was trying to set up local BioMart. BioMart web service is installed >> properly. But when I connect through biomaRt using listMart(), i get >> following error. >> >> listMarts(host="http://10.3.2.**36 <http: 10.3.2.36="">",port=9000, >>> >> path="/home/mlsc/BioMart/**release-0_8-candidate_6/") >> Request to BioMart web service failed. Verify if you are still connected >> to >> the internet. Alternatively the BioMart web service is temporarily down. >> Check http://www.biomart.org and verify if this website is available. >> Error: XML content does not seem to be XML, nor to identify a file name >> >> Can somebody suggest me, how to get out of this error? >> >> Regards, >> mlsc >> >> [[alternative HTML version deleted]] >> >> ______________________________**_________________ >> Bioconductor mailing list >> Bioconductor@r-project.org >> https://stat.ethz.ch/mailman/**listinfo/bioconductor<https: stat.e="" thz.ch="" mailman="" listinfo="" bioconductor=""> >> Search the archives: http://news.gmane.org/gmane.** >> science.biology.informatics.**conductor<http: news.gmane.org="" gmane="" .science.biology.informatics.conductor=""> >> > [[alternative HTML version deleted]]