Entering edit mode
Just a note on the limma prior:
In my current microarray study, the MSEs from the ordinary ANOVA are a
very
good fit to a LogNormal. They are not a very good fit to the scaled
chi-square distribution that is fitted by limma (although I concede
that
this probably does not matter).
Naomi S. Altman 814-865-3791 (voice)
Associate Professor
Bioinformatics Consulting Center
Dept. of Statistics 814-863-7114 (fax)
Penn State University 814-865-1348
(Statistics)
University Park, PA 16802-2111