Question: p-value vs adjusted p-value in DEXSeq

0

Delasa Aghamirzaie •

**70**wrote:Hi,
I have used DEXSeq for differential exon usage testing. I believe
what
DEXSeq uses as threshold for finding significant differentially
expressed
exons is p-adjust < 0.1 and it reports both p-value and p-adjust in
its
results.
My question is that what is the difference between p-adjust and
p-value?
when I use p-adjjust < 0.1 as threshold, I get a few number of genes,
while
in the case of p-value < 0.05, I get ,much more genes. I was wondering
which threshold is more accurate?
Sincerely Yours,
Delasa Aghamirzaie
Genetics, Bioinformatics, and Computational Biology (GBCB) PhD Student
Virginia Tech
Blacksburg, Virginia
[[alternative HTML version deleted]]

ADD COMMENT
• link
•
modified 6.5 years ago
by
Simon Anders •

**3.6k**• written 6.5 years ago by Delasa Aghamirzaie •**70**