On Fri, Jul 5, 2013 at 5:23 PM, Martin Morgan <mtmorgan@fhcrc.org> wrote: > Hi Leonard -- > > > On 07/03/2013 05:58 PM, Leonard Goldstein wrote: > >> Dear all, >> >> I ran into some trouble when trying to coerce SimpleList to >> CompressedList objects. >> >> It is possible to coerce CompressedList to SimpleList objects via the >> constructor function. For example: >> >> lc <- IntegerList(1:10, compress = TRUE) >>> class(lc)[1] >>> >> [1] "CompressedIntegerList" >> >>> class(IntegerList(lc, compress = FALSE))[1] >>> >> [1] "SimpleIntegerList" >> >> However, the converse is not supported: >> >> ls <- IntegerList(1:10, compress = FALSE) >>> class(ls)[1] >>> >> [1] "SimpleIntegerList" >> >>> class(IntegerList(ls, compress = TRUE))[1] >>> >> [1] "SimpleIntegerList" >> >> Would it be possible to implement coercion in both directions? >> > > Maybe Herve or Michael will offer up a proper solution. A back-door is > > relist(unlist(ls), ls) > > I already gave him that and was hoping someone else could fix it.. ;) But I admit it's my fault, and just checked in a fix. Martin > > > >> Many thanks for your help, >> >> Leonard >> >> >> sessionInfo() >>> >> R version 3.0.1 (2013-05-16) >> Platform: x86_64-apple-darwin10.8.0 (64-bit) >> >> locale: >> [1] en_US.UTF-8/en_US.UTF-8/en_US.**UTF-8/C/en_US.UTF-8/en_US.UTF-**8 >> >> attached base packages: >> [1] parallel stats graphics grDevices utils datasets methods >> base >> >> other attached packages: >> [1] IRanges_1.19.15 BiocGenerics_0.7.2 >> >> loaded via a namespace (and not attached): >> [1] stats4_3.0.1 tools_3.0.1 >> >>> >>> >> -- >> Leonard Goldstein, PhD >> Postdoctoral Research Fellow >> Department of Bioinformatics & Computational Biology >> Genentech, Inc. >> >> ______________________________**_________________ >> Bioconductor mailing list >> Bioconductor@r-project.org >> https://stat.ethz.ch/mailman/**listinfo/bioconductor<https: stat.e="" thz.ch="" mailman="" listinfo="" bioconductor=""> >> Search the archives: http://news.gmane.org/gmane.** >> science.biology.informatics.**conductor<http: news.gmane.org="" gmane="" .science.biology.informatics.conductor=""> >> >> > > -- > Computational Biology / Fred Hutchinson Cancer Research Center > 1100 Fairview Ave. N. > PO Box 19024 Seattle, WA 98109 > > Location: Arnold Building M1 B861 > Phone: (206) 667-2793 > > > ______________________________**_________________ > Bioconductor mailing list > Bioconductor@r-project.org > https://stat.ethz.ch/mailman/**listinfo/bioconductor<https: stat.et="" hz.ch="" mailman="" listinfo="" bioconductor=""> > Search the archives: http://news.gmane.org/gmane.** > science.biology.informatics.**conductor<http: news.gmane.org="" gmane.="" science.biology.informatics.conductor=""> > [[alternative HTML version deleted]]