HTqPCR package
0
0
Entering edit mode
@vetter-guillaume-6103
Last seen 9.6 years ago
Hello Heidi, I'm a real beginner in R and would like to analyze my miRNAs TLDA data with your R-package. I have 60 patients with 384*2 wells , I 'd like to use the following features in order to make nice normalization with your software. Well position patient type of cancer miRNA Ct A1 001 CRC hsa-miR-1 27.33 target A2 001 CRC has-miR-3 23.2 Endogenous Control ... In the same folder I put a : - 1 files.txt as mentioned in the description of the package and put inside the description of the samples to analyze (i.e the description of the patient and the corresponding .txt) - Each .txt of each samples which were described in the files.txt. I tried: library("HTqPCR") head(read.delim(file.path("D:/1-prestizia/laboratoire/protocole-stat- han dbook/statistique/R/HTqPCR/test-gui/test-gui", "files.txt"))) files <- read.delim(file.path("D:/1-prestizia/laboratoire/protocole-stat- handbook /statistique/R/HTqPCR/test-gui/test-gui", "files.txt")) and my problem is below! The readCtData function !!! impossible to open the sample1.txt! """"No such file or directory"""" raw <- readCtData (files = files$File, path = path)) #show(raw) Help J Thank you in advance for your help! Guillaume [[alternative HTML version deleted]]
Normalization Cancer Normalization Cancer • 654 views
ADD COMMENT

Login before adding your answer.

Traffic: 793 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6