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VETTER Guillaume
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10
@vetter-guillaume-6103
Last seen 9.6 years ago
Hello Heidi,
I'm a real beginner in R and would like to analyze my miRNAs TLDA data
with your R-package.
I have 60 patients with 384*2 wells , I 'd like to use the following
features in order to make nice normalization with your software.
Well position patient type of cancer miRNA
Ct
A1 001 CRC
hsa-miR-1 27.33 target
A2 001 CRC
has-miR-3 23.2 Endogenous Control
...
In the same folder I put a :
- 1 files.txt as mentioned in the description of the package
and put inside the description of the samples to analyze (i.e the
description of the patient and the corresponding .txt)
- Each .txt of each samples which were described in the
files.txt.
I tried:
library("HTqPCR")
head(read.delim(file.path("D:/1-prestizia/laboratoire/protocole-stat-
han
dbook/statistique/R/HTqPCR/test-gui/test-gui", "files.txt")))
files <-
read.delim(file.path("D:/1-prestizia/laboratoire/protocole-stat-
handbook
/statistique/R/HTqPCR/test-gui/test-gui", "files.txt"))
and my problem is below! The readCtData function !!! impossible to
open
the sample1.txt! """"No such file or directory""""
raw <- readCtData (files = files$File, path = path))
#show(raw)
Help J
Thank you in advance for your help!
Guillaume
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