Question: custom variant AnnotationDbi?
6.2 years ago by
Lescai, Francesco • 380
Lescai, Francesco • 380 wrote:
Hi guys, I would like to store lists of variants (SNPs and INDELs) in a convenient format to be used frequently with other bioconductor packages, and I was thinking to store them as Annotation databases. In this way I could store and query my own list of variants with annotations coming from my work and/or previous experiments. Most of the examples/vignettes I could find like SQLForge are however gene-centric. Can I create a custom one, maybe using SNPlocs as template? thanks for any suggestions, Francesco [[alternative HTML version deleted]]
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