Question: Pathview graph with multiple states/samples or time series
1
gravatar for Luo Weijun
6.1 years ago by
Luo Weijun1.5k
United States
Luo Weijun1.5k wrote:
Pathview now can plot/integrate/compare multiple states/samples or time series in the same graph. Please check Figure 6 - 7 for examples and Subsection 7.2 in the vignette for details. Graphviz view can automatic choose different types of legends, either on nodes (Figure 5b), edges (Figure 2) or both (Figure 3) depending on the specific pathways. These features are available with the latest release of pathview (1.1.7 or newer) and you need to work with BioC 2.13 (current devel version) or newer version: http://bioconductor.org/packages/2.13/bioc/html/pathview.html Thanks for your interest and support. Weijun Luo
pathways graph • 815 views
ADD COMMENTlink modified 21 months ago by atanas.kamburov0 • written 6.1 years ago by Luo Weijun1.5k
Answer: Pathview graph with multiple states/samples or time series
1
gravatar for atanas.kamburov
21 months ago by
atanas.kamburov0 wrote:

Thank you for this very useful addition!

Is it possible to add a legend of what the different states/samples are?  A simple list of condition/sample names written on the png will probably suffice for all applications.

Thanks again,
Atanas

ADD COMMENTlink written 21 months ago by atanas.kamburov0
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 204 users visited in the last hour