Entering edit mode
wang peter
★
2.0k
@wang-peter-4647
Last seen 10.3 years ago
i try to output the quality files, but the perCycleQuality picture is
vague
please see the attachment
i tried different R versions
library(ShortRead);
fastqfile="T2-1.fastq";
qa <- qa(dirPath=".", pattern=fastqfile, type="fastq");
report(qa, dest="qcReport", type="html");
--
shan gao
Room 231(Dr.Fei lab)
Boyce Thompson Institute for Plant Research
Cornell University
Tower Road, Ithaca, NY 14853-1801
Office phone: 1-607-254-1267(day)
Official email:sg839 at cornell.edu
Facebook:http://www.facebook.com/profile.php?id=100001986532253