RCytoscape: tudelft.CytoscapeRPC.CytoscapeRPCCallHandler: width is too small
0
0
Entering edit mode
Paul Shannon ▴ 750
@paul-shannon-5161
Last seen 7.1 years ago
Hi Coni, This error, "tudelft.CytoscapeRPC.CytoscapeRPCCallHandler: width is too small" is mysterious. I saw a rash of them a few months ago, but never before, and never since. What version of Java are you running? My only suggestion is a weak one: to restart Cytoscape. Which maybe you have already done. I will contact Jan Bot, the author of CytoscapeRPC, and perhaps find help there. I hope to port RCytoscape to the soon-to-be-released Cytoscape 3.1 which offers a different communication protocol to be used between R and Java. Could you let me know if a restart (and maybe a reboot) eliminates the error? - Paul Begin forwarded message: > From: Coni Horndli <coni.horndli at="" gmail.com=""> > Subject: tudelft.CytoscapeRPC.CytoscapeRPCCallHandler: width is too small > Date: January 17, 2014 12:36:37 PM PST > To: pshannon at systemsbiology.org > > Hi Paul, > > I am using a R code to draw a network in Cytoscape. The code runs fine the first few times but then suddenly I am getting the error below. > When I restart my computer the code runs fine again for a while. > Do you have any idea what the problem could be? > > Best, > Coni Horndli > > Error: faultCode: 0 faultString: Failed to invoke method redraw in class tudelft.CytoscapeRPC.CytoscapeRPCCallHandler: width is too small > >> sessionInfo() > R version 3.0.2 (2013-09-25) > Platform: x86_64-apple-darwin10.8.0 (64-bit) > > locale: > [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 > > attached base packages: > [1] stats graphics grDevices utils datasets methods base > > other attached packages: > [1] RCytoscape_1.12.0 XMLRPC_0.3-0 graph_1.40.1 > > loaded via a namespace (and not attached): > [1] BiocGenerics_0.8.0 parallel_3.0.2 RCurl_1.95-4.1 stats4_3.0.2 tools_3.0.2 > [6] XML_3.95-0.2
SystemsBiology Network RCytoscape SystemsBiology Network RCytoscape • 694 views
ADD COMMENT

Login before adding your answer.

Traffic: 283 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6