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Hi Bioconductor Developers and Users,
I'm using some of the Bioconductor packages
to analize Illumina 450k data for identifying differentially
methylated
positions/sites and Genes associated with these ones.
With the IMA package version 3.1.2, I've some lists as many as those
annotated by it and these lists are indexed by the Genes Symbols/Names
and
then there are the statistical estimates and the Methylation level.
I was able to get as many lists but this time indexed by the Cg ID so
I got
the differentially methylated positions associated with these Genes.
Now I was wondering if there is the possibility to do the vice versa
that
is to get from lists indexed by the Cg ID
(I got some lists of this type by dmpFinder in the Minfi package
version
1.8.9) as many lists indexed by Genes Symbols/Names associated with
these
positions/sites.
I'd appreciate any thoughts or suggestions.
Thanks in advance,
Giovanni
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