Dear Tengfei, greetings . About ggbio : please could you advise on how I could color-code some arches based on the intensity of the interaction (arch), as of now, my R code is : autoplot(r,geom="arch",aes(col=experiment,height=intensity,size=abs(i ntensity))) thanks ! -- bogdan [[alternative HTML version deleted]]

it works, thank you ! On Wed, May 21, 2014 at 6:50 PM, Tengfei Yin <yintengfei@gmail.com> wrote: > do you mean something like alpha = abs(intensity)? > > > On Wed, May 21, 2014 at 9:39 PM, Bogdan Tanasa <tanasa@gmail.com> wrote: > >> Dear Tengfei, greetings . >> >> About ggbio : please could you advise on how I could color-code some >> arches based on the intensity of the interaction (arch), >> >> as of now, my R code is : >> >> autoplot(r,geom="arch",aes(col=experiment,height=intensity,size=ab s(intensity))) >> >> thanks ! >> >> -- bogdan >> > > [[alternative HTML version deleted]]

do you mean something like alpha = abs(intensity)? On Wed, May 21, 2014 at 9:39 PM, Bogdan Tanasa <tanasa@gmail.com> wrote: > Dear Tengfei, greetings . > > About ggbio : please could you advise on how I could color-code some > arches based on the intensity of the interaction (arch), > > as of now, my R code is : > > autoplot(r,geom="arch",aes(col=experiment,height=intensity,size=abs (intensity))) > > thanks ! > > -- bogdan > [[alternative HTML version deleted]]