Hi BioC, I am using R-2.0 on Fedora Core 2 LINUX. I went to Bioconductor and I could not find latest GO verstion, it has only GO_1.5.1.tar.gz. > getRversion() [1] '2.0.0' > library(annaffy,warn.conflicts = FALSE); Error: package 'GO' 1.5.1 is loaded, but >= 1.6.0 is required by 'annaffy' I want to get GOALLLOCUSID and I am trying to get new version of GO and I could not find it. > GOLocmap<-mget(names(myGOCC$intCounts),GOALLLOCUSID); Error in mget(names(myGOCC$intCounts), GOALLLOCUSID) : Object "GOALLLOCUSID" not found When I do: > update.packages2(GO,develOK = TRUE); Note: argument `lib' is missing: using /usr/local/lib/R/library Note: You did not specify a download type. Using a default value of: Source This will be fine for almost all users Error in match(pkgs, libPkgs) : match requires vector arguments Please ,let me know if anyone did this before? Thank you, Saurin Jani -- |------------------------------------------------ | Bioinformatician | | Department of Cell Biology and Anatomy | Medical University of South Carolina (MUSC) | 173 Ashley Ave | Charleston,SC - 29407 (US) | | Email: jani@musc.edu | Phone: (843)792-5483 |------------------------------------------------