Are the endpoints included in intervals for SAF format?
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@ryan-c-thompson-5618
Last seen 7 months ago
Scripps Research, La Jolla, CA

In the documentation for featureCounts, it doesn't say whether endpoints are included or excluded. So which of Start and End, if any, are included in the intervals? Is it the same for both strands?

rsubread featurecounts saf • 1.0k views
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Wei Shi ★ 3.6k
@wei-shi-2183
Last seen 2 days ago
Australia/Melbourne/Olivia Newton-John …

Yes, both start and end coordinates are included in the intervals and that is the same for both strands.

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