Question

reading .idat files using genotype.Illumina in crlmm

0

Entering edit mode

Shi, Tao ▴ 720

@shi-tao-199

Last seen 9.5 years ago

Hi list,

When reading .idat files into R using crlmm, can I bypass the requirement of "samplesheet" as I don't have it (I only have .idat files) and I don't have access to GenomeStudio to create it?

Thanks!

Tao

crlmm idat • 2.2k views

ADD COMMENT • link updated 9.5 years ago by Matthew Ritchie ▴ 1000 • written 9.5 years ago by Shi, Tao ▴ 720

score 0 · Answer 1 · 2015-06-19

0

Entering edit mode

Matthew Ritchie ▴ 1000

@matthew-ritchie-650

Last seen 7 months ago

Australia

Hi Tao,

No, you don't need to provide a sample sheet - it is optional.

Cheers,

Matt

ADD COMMENT • link 9.5 years ago Matthew Ritchie ▴ 1000

0

Entering edit mode

Thanks, Matt!

ADD REPLY • link 9.5 years ago Shi, Tao ▴ 720