Hello all,
I just installed limmaGUI and expected to import Agilent
data but it seems to be GenPix is default and couldn't
find how I can change it.
I selected File>New then designate the directory I stored
data but pop up window is the one for GenPix.
Does anyone know how to import Agilent data using
limmaGUI?
Thanks!
Mari Miyamoto
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Hi,
What version of limmaGUI are you using?
Agilent format should be available as an option. limmaGUI
tries to guess the data format based on the file extension and
uses this guess to define the default radio button selection
in the dialog, but then the user is responsible for selecting
the correct radio button e.g. Spot, GenePix, ImaGene, Agilent
and clicking OK.
James
On Tue, 14 Dec 2004, [ISO-2022-JP] 宮本 真理 wrote:
> Hello all,
>
> I just installed limmaGUI and expected to import Agilent
> data but it seems to be GenPix is default and couldn't
> find how I can change it.
>
> I selected File>New then designate the directory I stored
> data but pop up window is the one for GenPix.
>
> Does anyone know how to import Agilent data using
> limmaGUI?
>
> Thanks!
>
> Mari Miyamoto
>
> __________________________________
> STOP HIV/AIDS.
> Yahoo! JAPAN Redribbon Campaign
>
> _______________________________________________
> Bioconductor mailing list
> Bioconductor@stat.math.ethz.ch
> https://stat.ethz.ch/mailman/listinfo/bioconductor
>
--
----------------------------------------------------------------------
----
James Wettenhall Tel: (+61 3) 9345
2629
Division of Genetics and Bioinformatics Fax: (+61 3) 9347
0852
The Walter & Eliza Hall Institute E-mail:
wettenhall@wehi.edu.au
of Medical Research, Mobile: (+61 / 0 ) 438 527
921
1G Royal Parade,
Parkville, Vic 3050, Australia
http://www.wehi.edu.au
Hello James,
Thank you for the reply. I use limmaGUI v1.3.6 with R
v2.0.1.
I put Agilent .txt file at working directory then selected
File>New.
Should I do anything else before doing that?
Thank you for your help.
Mari
--- James Wettenhall <wettenhall@wehi.edu.au> ?????
????
> Hi,
>
> What version of limmaGUI are you using?
>
> Agilent format should be available as an option.
> limmaGUI
> tries to guess the data format based on the file
> extension and
> uses this guess to define the default radio button
> selection
> in the dialog, but then the user is responsible for
> selecting
> the correct radio button e.g. Spot, GenePix,
> ImaGene, Agilent
> and clicking OK.
>
> James
>
> On Tue, 14 Dec 2004, [ISO-2022-JP] ?? ?? wrote:
>
> > Hello all,
> >
> > I just installed limmaGUI and expected to import
> Agilent
> > data but it seems to be GenPix is default and
> couldn't
> > find how I can change it.
> >
> > I selected File>New then designate the directory I
> stored
> > data but pop up window is the one for GenPix.
> >
> > Does anyone know how to import Agilent data using
> > limmaGUI?
> >
> > Thanks!
> >
> > Mari Miyamoto
> >
> > __________________________________
> > STOP HIV/AIDS.
> > Yahoo! JAPAN Redribbon Campaign
> >
> > _______________________________________________
> > Bioconductor mailing list
> > Bioconductor@stat.math.ethz.ch
> > https://stat.ethz.ch/mailman/listinfo/bioconductor
> >
>
> --
>
----------------------------------------------------------------------
----
> James Wettenhall
> Tel: (+61 3) 9345 2629
> Division of Genetics and Bioinformatics
> Fax: (+61 3) 9347 0852
> The Walter & Eliza Hall Institute E-mail:
> wettenhall@wehi.edu.au
> of Medical Research, Mobile:
> (+61 / 0 ) 438 527 921
> 1G Royal Parade,
> Parkville, Vic 3050, Australia
> http://www.wehi.edu.au
>
----------------------------------------------------------------------
----
>
__________________________________
STOP HIV/AIDS.
Yahoo! JAPAN Redribbon Campaign