Hi ALL,

I have obtained a long list of GO terms in GOSeq. First, I would like to ask did GOSeq result can be used for analysis in REVIGO? if yes, should I input p-value or corrected p-value (method="BH") and what is the cutoff value? If I separate BP, CC and MF to perform REVIGO, will it affect the result?

Second I would like to ask did REVIGO' result only report non-redundant term in result table? And should I only consider the cluster representative?

And I cannot enter the REVIGO website, is there any update or what happens?

Many thanks,

Jack