no date tag included in docker ps output
0
1
Entering edit mode
anton.kratz ▴ 60
@antonkratz-8836
Last seen 7 months ago
Japan, Tokyo, The Systems Biology Insti…

I want to determine which "Date tag" a running instance of docker-R/Bioconductor has. I started the instance without supplying a date tag and now want to figure out which data tag it has (to make my analysis more reproducible).

I am following the example from "Docker and Bioconductor", section 7.2 Reproducibility (http://bioconductor.org/help/course-materials/2015/BioC2015/docker_and_bioconductor.html#reproducibility):

docker run -ti --rm bioconductor/devel_base


and then I type in a different bash instance:

docker ps

As output I get:

CONTAINER ID        IMAGE                     COMMAND                  CREATED             STATUS              PORTS               NAMES
438916e74438        bioconductor/devel_base   "/usr/bin/supervisord"   9 seconds ago       Up 8 seconds        8787/tcp            cocky_visvesvaraya

Unlike in the tutorial example, there is simply no date tag included! How can I figure out the date tag in this situation?

docker reproducibility • 2.0k views
ADD COMMENT
0
Entering edit mode

If you start the container with a specific tag, that tag will show up in docker ps:

docker run -ti --rm bioconductor/devel_base:20150923

Output of docker ps:

CONTAINER ID        IMAGE                              COMMAND                CREATED             STATUS              PORTS                    NAMES

807278b92688        bioconductor/devel_base:20150923   "/usr/bin/supervisor   7 seconds ago       Up 5 seconds        0.0.0.0:8787->8787/tcp   happy_ptolemy 
ADD REPLY
0
Entering edit mode

Hi Dan, yes, thanks, I am aware of that. However according to your own tutorial the behavior should be different, as you write: "If you didn’t start the image with a specific tag, you can determine the tag of a running container with the docker ps command, for example [...]" (and then the steps which I followed, please see above). But apparently, this does not work. I followed the steps exactly like in the tutorial and I cannot get the information what the tag of the running instance is.

ADD REPLY
1
Entering edit mode

Then the tutorial is wrong (I'll fix it) and you should specify the date tag when starting the container.

ADD REPLY
0
Entering edit mode

Okay I understand, thanks for the clarification!

ADD REPLY

Login before adding your answer.

Traffic: 938 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6