Question

edgeR in R 3.2.2

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glorobame • 0

@glorobame-9034

Last seen 10.1 years ago

I´m using R 3.2.2 and trying to install edgeR package. ´m getting a warning, it says it is not available in R 3.2.2. Somebody knows how can I get edgeR by using this version of R?

edgeR • 3.1k views

ADD COMMENT • link updated 10.1 years ago by Gordon Smyth 53k • written 10.1 years ago by glorobame • 0

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Show us the command you're trying to run, and the output of the sessionInfo() command.

ADD REPLY • link 10.1 years ago Aaron Lun ★ 29k

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the command is just the basic one I know to install libraries:

install.packages("edgeR")
Installing package into ‘C:/Users/HENRRY/Documents/R/win-library/3.2’
(as ‘lib’ is unspecified)
Warning in install.packages :
  package ‘edgeR’ is not available (for R version 3.2.2)

ADD REPLY • link 10.1 years ago glorobame • 0

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Warning in install.packages :
  package ‘edgeR’ is not available (for R version 3.2.2)

ADD REPLY • link 10.1 years ago glorobame • 0

score 2 · Answer 1 · 2015-10-22

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Aaron Lun ★ 29k

@alun

Last seen 5 hours ago

The city by the bay

Bioconductor and R are not synonymous. Try reading Bioconductor's installation instructions here.

ADD COMMENT • link 10.1 years ago Aaron Lun ★ 29k