Question

edgeR in R 3.2.2

0

Entering edit mode

glorobame • 0

@glorobame-9034

Last seen 8.5 years ago

I´m using R 3.2.2 and trying to install edgeR package. ´m getting a warning, it says it is not available in R 3.2.2. Somebody knows how can I get edgeR by using this version of R?

edgeR • 2.8k views

ADD COMMENT • link updated 8.5 years ago by Gordon Smyth 50k • written 8.5 years ago by glorobame • 0

0

Entering edit mode

Show us the command you're trying to run, and the output of the sessionInfo() command.

ADD REPLY • link 8.5 years ago Aaron Lun ★ 28k

0

Entering edit mode

the command is just the basic one I know to install libraries:

install.packages("edgeR")
Installing package into ‘C:/Users/HENRRY/Documents/R/win-library/3.2’
(as ‘lib’ is unspecified)
Warning in install.packages :
  package ‘edgeR’ is not available (for R version 3.2.2)

ADD REPLY • link 8.5 years ago glorobame • 0

0

Entering edit mode

Warning in install.packages :
  package ‘edgeR’ is not available (for R version 3.2.2)

ADD REPLY • link 8.5 years ago glorobame • 0

score 2 · Answer 1 · 2015-10-22

2

Entering edit mode

Aaron Lun ★ 28k

@alun

Last seen 1 hour ago

The city by the bay

Bioconductor and R are not synonymous. Try reading Bioconductor's installation instructions here.

ADD COMMENT • link 8.5 years ago Aaron Lun ★ 28k