I am using RTCGAtoolbox package to download data from TCGA. Rigth now, I have a FirehoseData object with all the data available and I want to extract the methylation. If I use getData function:
Error in .getListData(object@Methylation, platform) : Please set platform
I have looked up in the documentation and platform is only defined as a list of ids but there are not more clues. There is not information in the vignette either. How can extract methylation data? And, is there any other dataset that requires to set the platform?