Entering edit mode
Hi,
I am running into truncated phenotype categories when I use GRASP2 like this:
> library(grasp2db) > GRASP2() %>% tbl(., 'study') %>% filter(PaperPhenotypeDescription %like% '%cystic fibrosis%') %>% select(PaperPhenotypeDescription) %>% as.data.frame
PaperPhenotypeDescription
1 Cystic fibrosis, lung disease in
2 Cystic fibrosis, severity of
3 Cystic fibrosis with meconium ileus
4 Diabetes in cystic fibrosis
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Although cystic fibrosis-related categories in GRASP web page are listed as:
- Cross-sectional lung function - Cystic fibrosis lung disease severity - Cystic fibrosis-related diabetes - Cystic fibrosis-related diabetes in patients homozygous for F508del CFTR - Longitudinal lung function - Lung disease severity - Meconium ileus in cystic fibrosis - Meconium ileus in cystic fibrosis (female) - Meconium ileus in cystic fibrosis (male) |
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So, my question is why are the categories truncated and why don't they match to the categories on the GRASP web page?
