Error with , library(limma) !!!
0
0
Entering edit mode
@libyatahani-9206
Last seen 7.6 years ago
Libyan Arab Jamahiriya

Hi all ,

how I can fix the following problem with package(limma) in R ??

> biocLite("limma")
BioC_mirror: http://bioconductor.org
Using Bioconductor version 3.0 (BiocInstaller 1.16.5), R version 3.1.3.
Installing package(s) 'limma'
trying URL 'http://bioconductor.org/packages/3.0/bioc/bin/windows/contrib/3.1/limma_3.22.7.zip'
Content type 'application/zip' length 4628474 bytes (4.4 MB)
opened URL
downloaded 4.4 MB

package ‘limma’ successfully unpacked and MD5 sums checked
Warning: cannot remove prior installation of package ‘limma’

The downloaded binary packages are in
        C:\Users\SONY\AppData\Local\Temp\Rtmp8m3DWy\downloaded_packages
Old packages: 'MASS', 'mgcv', 'boot', 'class', 'cluster', 'codetools',
  'foreign', 'KernSmooth', 'lattice', 'MASS', 'Matrix', 'mgcv', 'nlme', 'nnet',
  'rpart', 'spatial', 'survival'
Update all/some/none? [a/s/n]: n
> library(limma)
Error in library(limma) : there is no package called ‘limma’
limma • 3.0k views
ADD COMMENT
0
Entering edit mode

You're using a version of Bioconductor that's two releases out of date. I would suggest that you install the latest release of R (3.2.2), install the latest version of Bioconductor (3.2) and then install the latest version of limma (3.26.3).

ADD REPLY
0
Entering edit mode

Thanks dear Aaron Lun

I will try to install the latest version of R and bioconductor then loading package of limma..

 

ADD REPLY

Login before adding your answer.

Traffic: 692 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6