Dear Users, I have Affymetrix Data. There are 5 animals and I have 2 technical replicates. I am trying to compare these technical replicates to ensure they are clean. I was wondering if anyone could please provide me some input on this. If anyone knows any method I could use for this. When I say clean I mean to verify if any contamination or other factors caused a change in the values (readings) obtained between the technical replicates. So I would like to do some data analysis to compare these and maybe come to some summary that these replicates are good to use. I would greatly appreciate any input or advice. Thank you, Regards, Shruti [[alternative HTML version deleted]]