EBseq-HMM needs a lot of memory?
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liamarseg • 0
@liamarseg-9740
Last seen 8.2 years ago

Hello,

I'm trying to use EBseq-HMM to analyze some time course data. In my case I have 12 time points with 3 biological replicates, 36 samples in total. When I run the pipeline, it seems that it needs an lot of resources, running it in a cluster asking for 64gb of ram does't seem to be enough to finish de analysis. The resources needed to run this pipeline are not discussed in the paper and I just needed to know if it's a problem that other people are facing, or is it due to the amount of time points that my design has

ebseq-hmm • 749 views
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