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sakan1000
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@sakan1000-9749
Last seen 9.1 years ago
Input data: adjacency matrix, tab-separated '1' and '0' characters in file "matrix.tsv"
matrix = as.matrix(read.table("matrix.tsv")) my_graph3 = graph_from_adjacency_matrix(matrix) plot.modules(my_graph3)
Result:
Error in intI(j, n = d[2], dn[[2]], give.dn = FALSE) :
index larger than maximal 34
sessionInfo() output:
R version 3.2.2 (2015-08-14) Platform: x86_64-redhat-linux-gnu (64-bit) Running under: Fedora 21 (Twenty One) locale: [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C LC_TIME=en_GB.utf8 [4] LC_COLLATE=en_US.UTF-8 LC_MONETARY=en_GB.utf8 LC_MESSAGES=en_US.UTF-8 [7] LC_PAPER=en_GB.utf8 LC_NAME=C LC_ADDRESS=C [10] LC_TELEPHONE=C LC_MEASUREMENT=en_GB.utf8 LC_IDENTIFICATION=C attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] netbiov_1.4.0 igraph_1.0.1 loaded via a namespace (and not attached): [1] colorspace_1.2-6 scales_0.3.0 Matrix_1.2-3 magrittr_1.5 plyr_1.8.3 [6] tools_3.2.2 gtable_0.1.2 Rcpp_0.12.3 ggplot2_2.0.0 grid_3.2.2 [11] munsell_0.4.3 lattice_0.20-33
Is there solution for this thread? I have encountered exactly the same problem.