I want to read the BAM file in R studio for Package RapdiR using this command.
> mask <- "mask.bed"
> makeBinnedCountsFile(bam.file.list = c("file1.bam", "file2.bam"),
+ sampleIDs = c("sample1", "sample2"),
+ binned.counts.fname = output.fname,
+ k = 20000)
so please tell me what should be the input file for this command