Hi Anthony, I believe that this bug has been fixed. Please try the "development" version of hopach (v1.0.2): http://www.bioconductor.org/repository/devel/package/html/hopach.html Let me know if the problem persists. Cheers, Katie > Date: Mon, 14 Mar 2005 07:38:45 +0100 > From: Anthony Bosco <anthonyb@ichr.uwa.edu.au> > Subject: [BioC] [BioC}: export Hopoah to treeview > To: bioconductor@stat.math.ethz.ch > Message-ID: <f05111a04be5ae18e54e3@[10.0.5.134]> > Content-Type: text/plain; charset="us-ascii" ; format="flowed" > > Hi, > > I am trying to export results from Hopoach to treeview and I get the > following error: > > > hopach2tree(data.sub, file = "HOPACH", hopach.genes=gene.hobj, > >hopach.arrays = NULL, dist.genes= gene.dist, gene.names= NULL) > GENE TREE: > Working on level 16 > Working on level 15 > Working on level 14 > Working on level 13 > Working on level 12 > Working on level 11 > Working on level 10 > Working on level 9 > Working on level 8 > Working on level 7 > Working on level 6 > Working on level 5 > Working on level 4 > Working on level 3 > Working on level 2 > Working on level 1 > Error in rep.default(NA, maxnode - ni) : invalid number of copies in "rep" > > > regards > > > Anthony > -- > ______________________________________________ > > Anthony Bosco - PhD Student > > Institute for Child Health Research > (Company Limited by Guarantee ACN 009 278 755) > Subiaco, Western Australia, 6008 > > Ph 61 8 9489 , Fax 61 8 9489 7700 > email anthonyb@ichr.uwa.edu.au