Maria Persico <maria@cbm.bio.uniroma2.it> writes: > Dear bioconductor mailing list, > > I have some pairs of genes and I would like to measure their "distances" > on the GO molecular function graph. > > So I wrote this lines of code: > Try try(): distances<-numeric(100) for (i in 1:100){ goanal <- try(simLL(as.character(hmapr$V1[i]),as.character(hmapr$V2[i]),"MF")) if (inherits(gonal, "try-error")) { goanal <- list() goanal[["sim"]] <- NA print(goanal$sim) distances[i]<-goanal$sim rm(goanal) } + seth