moe430v2 annotation package?
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Fatima Nunez ▴ 30
@fatima-nunez-1190
Last seen 9.6 years ago
Hello all, I'm trying to download the annotation package for the moe430v2 Affy chip. Itdoesn't seem to appear in the MetaData link in Bioconductor and when I search the mail archives I do find a thread regarding the annotation package for this chip: *************************** From: John Zhang (jzhang@landfield.com) Date: Fri Oct 22 2004 - 19:21:41 EDT Next message: Ren Na: "[BioC] spot weight in limma" Previous message: Saurin D. Jani: "[BioC] stam:in.local(.Object, ...):couldn't find function "balanced.folds"" Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] ---------------------------------------------------------------------- ------ ---- >Thanks for the suggestion, that seemed to do the trick. Note that the >package is apparently called "moe430v2," which seems to be inconsistent >with how the probe and cdf packages are named ("mouse4302"). We actually have mouse4302 in the devel track. moe430v2 will go soon. ********** May be I'm not looking in the right place? Is there any way I can get this package? Thanks so much for your help, Fatima -- No virus found in this outgoing message. Checked by AVG Anti-Virus.
Annotation GO mouse4302 cdf probe Annotation GO mouse4302 cdf probe • 1.0k views
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John Zhang ★ 2.9k
@john-zhang-6
Last seen 9.6 years ago
>I'm trying to download the annotation package for the moe430v2 Affy chip. >Itdoesn't seem to appear in the MetaData link in Bioconductor and when I >search the mail archives I do find a thread regarding the annotation package >for this chip: try: >library("reposTools") >install.packages2("mouse4302") > >*************************** >From: John Zhang (jzhang@landfield.com) >Date: Fri Oct 22 2004 - 19:21:41 EDT > >Next message: Ren Na: "[BioC] spot weight in limma" >Previous message: Saurin D. Jani: "[BioC] stam:in.local(.Object, >...):couldn't find function "balanced.folds"" >Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] > >--------------------------------------------------------------------- ------- >---- > > >>Thanks for the suggestion, that seemed to do the trick. Note that the >>package is apparently called "moe430v2," which seems to be inconsistent >>with how the probe and cdf packages are named ("mouse4302"). > > >We actually have mouse4302 in the devel track. moe430v2 will go soon. >********** > >May be I'm not looking in the right place? Is there any way I can get this >package? > >Thanks so much for your help, > >Fatima > >-- >No virus found in this outgoing message. >Checked by AVG Anti-Virus. > >_______________________________________________ >Bioconductor mailing list >Bioconductor@stat.math.ethz.ch >https://stat.ethz.ch/mailman/listinfo/bioconductor Jianhua Zhang Department of Medical Oncology Dana-Farber Cancer Institute 44 Binney Street Boston, MA 02115-6084
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Thanks, that sorted it out. > -----Original Message----- > From: John Zhang [mailto:jzhang@jimmy.harvard.edu] > Sent: Tuesday, May 10, 2005 3:07 PM > To: bioconductor@stat.math.ethz.ch; fnunez@vhebron.net > Subject: Re: [BioC] moe430v2 annotation package? > > > >I'm trying to download the annotation package for the moe430v2 Affy chip. > >Itdoesn't seem to appear in the MetaData link in Bioconductor and when I > >search the mail archives I do find a thread regarding the annotation > package > >for this chip: > > try: > > >library("reposTools") > >install.packages2("mouse4302") > > > > > > > >*************************** > >From: John Zhang (jzhang@landfield.com) > >Date: Fri Oct 22 2004 - 19:21:41 EDT > > > >Next message: Ren Na: "[BioC] spot weight in limma" > >Previous message: Saurin D. Jani: "[BioC] stam:in.local(.Object, > >...):couldn't find function "balanced.folds"" > >Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] > > > >------------------------------------------------------------------- ------ > --- > >---- > > > > > >>Thanks for the suggestion, that seemed to do the trick. Note that the > >>package is apparently called "moe430v2," which seems to be inconsistent > >>with how the probe and cdf packages are named ("mouse4302"). > > > > > >We actually have mouse4302 in the devel track. moe430v2 will go soon. > >********** > > > >May be I'm not looking in the right place? Is there any way I can get > this > >package? > > > >Thanks so much for your help, > > > >Fatima > > > >-- > >No virus found in this outgoing message. > >Checked by AVG Anti-Virus. > > > >_______________________________________________ > >Bioconductor mailing list > >Bioconductor@stat.math.ethz.ch > >https://stat.ethz.ch/mailman/listinfo/bioconductor > > Jianhua Zhang > Department of Medical Oncology > Dana-Farber Cancer Institute > 44 Binney Street > Boston, MA 02115-6084 > > > -- > No virus found in this incoming message. > Checked by AVG Anti-Virus. > Version: 7.0.308 / Virus Database: 266.11.6 - Release Date: 5/6/2005 > -- No virus found in this outgoing message. Checked by AVG Anti-Virus.
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