mpralm error
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gywang912 • 0
@c5a694f1
Last seen 19 months ago

Getting this error for mpralm package: Coefficients not estimable: alleleB Partial NA coefficients for 2 probe(s)Coefficients not estimable: alleleB Coefficients not estimable: alleleB

design <- data.frame(intcpt = 1, alleleB = grepl("lentiviral_BJAB_stim_1_B", colnames(mpraset_example2)))
block_vector <- rep(1,2)
## trace("mpralm",edit=TRUE)
mpralm_allele_fit <- mpralm(object = mpraset_example2, design = design, aggregate = "none", normalize = TRUE, block = block_vector, model_type = "corr_groups", plot = TRUE)
mpra • 201 views
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