RNA Seq - Venn Diagramm - display exclusively expressed genes
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@94b23fe6
Last seen 14 hours ago
Germany

Dear all, I like to visualize the exclusively expressed genes of each group from my RNA seq experiment. For that, I´ld like to use normalized read counts since that appears more useful to me than DEG. But I have no clue how. I did DEG analysis using DESeq2 (successfull), but how to get a list of normalized read counts differing from the other group I dont know. Please help.

VennDetail DESeq2 • 127 views
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@mikelove
Last seen 1 hour ago
United States

We have a vignette and a workflow, both with example code.

See the workflow here:

https://www.bioconductor.org/packages/devel/workflows/vignettes/rnaseqGene/inst/doc/rnaseqGene.html

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