Circlize - Error: not enough space for cells at track index '5'.
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lessismore ▴ 20
@lessismore
Last seen 11 weeks ago
Italy

Hi all, it's already few hours that I spending trying to fix circlize errors.

1) Does somebody know what means this error? (below)

2) Does somebody know an alternative package to try ?

Thanks in advance for any help


> dput(my_matrix2)
structure(c("1", "0.95", "0.95", "0.95", "0.95", "0.95", "1", 
"1", "0.9", "1", "0.95", "0.95", "0.95", "0.9", "0.85", "1", 
"1", "0.95", "1", "1", "0.9", "0.95", "0.8", "0.7", "1", "0.9", 
"0.9", "1", "1", "0.95", "0.95", "0.9", "0.85", "0.9", "0.85", 
"0.55", "1", "1", "0.9", "0.8", "0", "0.8", "0.5517241", "0.5517241", 
"0.5517241", "0.5517241", "0.5172414", "0.5517241", "0.5172414", 
"0", "0.5172414", "0.5517241", "0", "0", "0.5517241", "0.5172414", 
"0.5172414", "0", "0.5517241", "0.5172414", "0.5517241", "0.5517241", 
"0", "0.5172414", "0", "0", "0.5517241", "0", "0", "0.5517241", 
"0.5517241", "0", "0.5172414", "0.5517241", "0.5517241", "0", 
"0", "0.5517241", "0", "0.5172414", "0.5172414", "0", "0", "0", 
"0.9411765", "0.8235294", "0.8235294", "0.8823529", "0.8823529", 
"0.6470588", "0.8823529", "0.8823529", "0.7647059", "0.9411765", 
"0.9411765", "0.9411765", "0.8823529", "0.7647059", "0.6470588", 
"0.8823529", "0.8235294", "0.8235294", "0.9411765", "0.9411765", 
"0.9411765", "0", "0.7058824", "0.8823529", "0.9411765", "0.9411765", 
"0.8235294", "0.9411765", "0.9411765", "0.5882353", "0.9411765", 
"0.9411765", "0.6470588", "0", "0", "0.7647059", "0.9411765", 
"0.9411765", "0", "0.6470588", "0.9411765", "0.8823529"), .Dim = c(42L, 
3L), .Dimnames = list(NULL, c("aba", "bea", "cea")))

> dput(split)
structure(c(3L, 3L, 3L, 2L, 3L, 2L, 2L, 2L, 3L, 1L, 2L, 2L, 1L, 
2L, 3L, 1L, 3L, 3L, 1L, 1L, 1L, 1L, 3L, 2L, 3L, 2L, 1L, 2L, 3L, 
2L, 1L, 3L, 3L, 1L, 3L, 2L, 1L, 3L, 1L, 1L, 2L, 3L), .Label = c("a", 
"b", "c"), class = "factor")

col_fun1 = colorRamp2(c(0, 0.5, 1), c("blue", "green", "red"))

circos.heatmap(my_matrix2, split = split, col = col_fun1)

Error: not enough space for cells at track index '5'.
circlize • 995 views
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