Entering edit mode
error :DESeq2 analysis has not been run for this contrast
DB.DESeq2 = 0
I think until this step everything is ok
here is my file↓
here is my code ↓
# dbObj_contrast <- dba.contrast(dbObj_count, contrast=c("Condition","Responsive","Resistant"))
#dbObj_contrast
#dbObj_analyze <- dba.analyze(dbObj_contrast)
#dba.show(dbObj_analyze,bContrasts=TRUE)
After I install the package "stephenslab/mixsqp" I still have the same problem.
My DB.DESeq2 is shows 0.