Entering edit mode
What should I do to deal with the following sentence?
Upgrade 4 packages to Bioconductor version '3.15'? [y/n]:
> if (!require("BiocManager", quietly = TRUE))
+ install.packages("BiocManager")
trying URL 'https://cran.rstudio.com/bin/windows/contrib/4.2/BiocManager_1.30.18.zip'
Content type 'application/zip' length 360733 bytes (352 KB)
downloaded 352 KB
package ‘BiocManager’ successfully unpacked and MD5 sums checked
The downloaded binary packages are in
C:\Users\L\AppData\Local\Temp\RtmpA7OiKC\downloaded_packages
> BiocManager::install(version = "3.15")
'getOption("repos")' replaces Bioconductor standard repositories, see '?repositories' for details
replacement repositories:
CRAN: https://cran.rstudio.com/
Upgrade 4 packages to Bioconductor version '3.15'? [y/n]:
thankyou, I typed “yes” earlier, haha
I will assume that it has worked for you now. The dialog is asking for "y" rather than "yes", i.e., you need to type one letter, not three.