Developing new features
1
0
Entering edit mode
@d12fee30
Last seen 18 months ago
Spain

Hello community!

I am the author of several software programs including this astronomy program: https://winstars.net/en I recently had the opportunity to participate in the activities of a neuroscience laboratory in Madrid. I learned how to use Bioconductor and I would like to participate in the development of new features (if possible). The researchers in the lab complain about the slowness of these tools when used on simple PCs. So I wonder if it would not be interesting to integrate Cuda in some indexing packages, I think of Bowtie2 or Salmon for example... (there is a version of bowtie2 that works with cuda, but it seems old). But the task would be very complex I guess. There are simpler things to do, like creating a wrapper for Salmon or something like that. What do you think would be useful to do at this moment for Bioconductor users?

With my thanks,

Franck

Rbowtie2 • 625 views
ADD COMMENT
0
Entering edit mode

You might also consider posting on the bioc-devel@r-project.org mailing list where there are current maintainers and developers or our slack channel to get additional feedback.

ADD REPLY
0
Entering edit mode
@d12fee30
Last seen 18 months ago
Spain

Ok ! thanks shepherl

ADD COMMENT

Login before adding your answer.

Traffic: 634 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6