cant' download fgsea_1.20.0.tar.gz
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luca.s ▴ 50
@lucas-24386
Last seen 4 months ago
Italy

Hi, it seems that I can't download fgsea_1.20.0.tar.gz. Tried both from R v4.1.0 and from web browser (https://bioconductor.org/packages/3.14/bioc/html/fgsea.html; with different web browsers, different OS, different connections: no access to the file). Is it just me? Could anyone check and suggest a solution? Thank you for the help.


# include your problematic code here with any corresponding output 
# please also include the results of running the following in an R session 

sessionInfo( )
download fgsea • 588 views
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Mike Smith ★ 6.6k
@mike-smith
Last seen 11 hours ago
EMBL Heidelberg

It looks like the site that hosts the archived versions of Bioconductor packages is currently down (https://mghp.osn.xsede.org/).

You could try the function chooseBiocMirror() and select an alternative. In my experience option 2 (Germany (Gottingen) [https]) often works well.

Alternatively (and probably recommended), you can update to using R 4.3 and Bioconductor 3.17. Then the packages will come from a different site, and you'll be getting the most up-to-date versions.

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the mirror you suggested worked. thanks

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